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(单词翻译:双击或拖选)
By Zulima Palacio
Washington, DC
27 January 2006
watch Gene1 report
Mapping the Human Genome has been one of the most complex research projects of recent decades. Its findings could open many windows, including cures for illnesses. A group of scientists in San Antonio, Texas has identified a gene on chromosome2 15, which apparently3 regulates inflammation. The finding could have far reaching implications for treating heart disease, diabetes4, obesity5, arthritis6 and even Alzheimer's. Carol Pearson narrates7.
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"This is the largest super computing8 cluster in the world that is completely dedicated9 to human genome," points out John Blangero, Senior Genetics Scientist, at the Southwest Foundation for Biomedical Research.
He calls it "the computer ranch," a 1500-computer cluster. Running millions of genetic10 analyses here in the San Antonio, Texas laboratory saved years of work, and helped find what could be one of the key genes12 responsible for inflammation in the human body. It is the Selenoprotein S, also known by its short name: SEPS1.
Blangero and a colleague created the software to run the genetic program with nearly six terabytes of memory -- the equivalent of computer memory for 1.8 million songs or over 10 years of uninterrupted music.
At the other end of the Foundation, geneticist Joanne Curran generates the basic information from the lab.
Dr. Curran says blood samples from about 40 families with 1400 individuals were brought to this lab, where their DNA13 was extracted and used for all the gene studies. In all, the lab has 48,000 gene transcripts14 for each individual person.
Dr. Joanne Curran
"An example was one project that took two hours to analyze15 on the ranch with 1500 processors. That would have taken us seven years to do with one processor,” she says. “That's just an example of the time that was able to calculate."
Dr. Blangero and his team identified SEPS1, previously16 unknown. The gene plays a key role in how the body responds to inflammation.
"When we look at this gene and map it on to the human genome, we saw that it’s found in an area that has been associated with things like type-one diabetes, Alzheimers disease, rheumatoid arthritis, so it started to be a trend there,” he said. “These are all things that have some kind of inflammatory component17."
Dr. Blangero and his team found that people with diabetes have a lower level of Selenoprotein S and they expect similar results in heart disease patients.
Dr. John Blangero
Right now they are testing the gene in relation to parasitic18 infection. But Dr. Blangero warns that there is a huge difference -- and a vast amount of time -- between identifying a gene and finding out what it does, and using that knowledge to diagnose or treat diseases. Even so, he expects his work will benefit patients some day.
"I would say this pathway will end up being important in a pharmaceutical19 type of intervention20."
1 gene | |
n.遗传因子,基因 | |
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2 chromosome | |
n.染色体 | |
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3 apparently | |
adv.显然地;表面上,似乎 | |
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4 diabetes | |
n.糖尿病 | |
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5 obesity | |
n.肥胖,肥大 | |
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6 arthritis | |
n.关节炎 | |
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7 narrates | |
v.故事( narrate的第三人称单数 ) | |
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8 computing | |
n.计算 | |
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9 dedicated | |
adj.一心一意的;献身的;热诚的 | |
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10 genetic | |
adj.遗传的,遗传学的 | |
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11 ranch | |
n.大牧场,大农场 | |
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12 genes | |
n.基因( gene的名词复数 ) | |
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13 DNA | |
(缩)deoxyribonucleic acid 脱氧核糖核酸 | |
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14 transcripts | |
n.抄本( transcript的名词复数 );转写本;文字本;副本 | |
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15 analyze | |
vt.分析,解析 (=analyse) | |
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16 previously | |
adv.以前,先前(地) | |
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17 component | |
n.组成部分,成分,元件;adj.组成的,合成的 | |
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18 parasitic | |
adj.寄生的 | |
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19 pharmaceutical | |
adj.药学的,药物的;药用的,药剂师的 | |
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20 intervention | |
n.介入,干涉,干预 | |
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